Round Table Discussion #3: Spatial-Omics

Thursday, April 18, 2024
1:30 p.m. to 3:00 p.m. MST

Room: Xavier

Lead by

DMCC support staff:

Agenda

Mountain Standard Time Agenda Item

1:30-1:50pm

Platform discussion, Big Picture, Clinical Implications and Utility

  1. How is technology evolving in relation to early detection of aggressive cancer?
  2. Defining early detection applications - can technology identify “true precancer”? Early relapse and resistance detection?
  3. Does current technology provide single cell resolution? Do we need single cell resolution?
  4. Clinical implications?
  5. Longitudinal sampling?

1:50-2:10pm

Technical Challenges of Implementing Spatial-Omics Technologies

  1. Preanalytical considerations for tissue preparation (Fresh, OCT, FFPE?)
  2. QA/QC considerations
  3. Verification and validation of instruments
  4. Validation of methods and assays – reproducibility, generalizability
  5. Cost

2:10-2:30pm

Computational and Bioinformatics Challenges

  1. Benchmarking new tools
  2. QA/QC considerations
  3. Verification and validation of bioinformatic pipelines
  4. Development of user-friendly data visualization/analysis tools
  5. Data sharing
  6. Reproducibility of data across labs
  7. Cost

2:30-3:00pm

Open Discussion

  1. Establishment of knowledge Network (organ specific?)
  2. Organizing working group
  3. Generating collaborative projects ideas
  4. Summary of round-table discussion