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Science Data

Data collected about science.

The EDRN is involved in researching hundreds of biomarkers. The following is a partial list of associated results from biomarker research that are currently available for access and viewing. The bioinformatics team at EDRN is currently working with EDRN collaborative groups to capture, curate, review and post additional data as it is available. EDRN also provides secure access to additional biomarker information not available to the public that is currently under review by EDRN research groups. If you have access to this information, please ensure that you are logged in. If you are unsure or would like access, please contact the operator for more information.

Contents

Title PI(s) Organ Protocol Collaborative Group
Analysis of pancreatic cancer biomarkers in PLCO set Lokshin, Anna Biomarkers for early detection of pancreatic cancer GI
Autoantibody Biomarkers Hanash, Samir Validation of Protein Markers for Lung Cancer Using CARET Sera and Proteomics Techniques Lung and Upper Aerodigestive
BCCA_Affy6.0RawData Gazdar, Adi Identification of biomarkers for lung cancer in never smokers Lung and Upper Aerodigestive
Barrett's Esophagus Methylation Profile Dataset Meltzer, Stephen Barrett's Esophagus Methylation Profiles GI and Other Associated
Basophile-D-discoideum-CID-LTQ Wang, Dong Basophile: Accurate Fragment Charge State Prediction Improves Peptide Identification Rates Not Applicable
Basophile-E-coli-HCD-OrbiVelos Wang, Dong Basophile: Accurate Fragment Charge State Prediction Improves Peptide Identification Rates Not Applicable
Basophile-S-cerevisiae-CID-Chymotrypsin Wang, Dong Basophile: Accurate Fragment Charge State Prediction Improves Peptide Identification Rates Not Applicable
Basophile-S-cerevisiae-CID-LysC Wang, Dong Basophile: Accurate Fragment Charge State Prediction Improves Peptide Identification Rates Not Applicable
Basophile-S-cerevisiae-CID-ProteinaseK Wang, Dong Basophile: Accurate Fragment Charge State Prediction Improves Peptide Identification Rates Not Applicable
Basophile-S-cerevisiae-CID-Trypsin Wang, Dong Basophile: Accurate Fragment Charge State Prediction Improves Peptide Identification Rates Not Applicable
Basophile-S-oneidensis-HCD-OrbiVelos Wang, Dong Basophile: Accurate Fragment Charge State Prediction Improves Peptide Identification Rates Not Applicable
COPY_NUMBER_LEV1 Gazdar, Adi Identification of biomarkers for lung cancer in never smokers Lung and Upper Aerodigestive
COPY_NUMBER_LEV2 Gazdar, Adi Identification of biomarkers for lung cancer in never smokers Lung and Upper Aerodigestive
COPY_NUMBER_LEV3 Gazdar, Adi Identification of biomarkers for lung cancer in never smokers Lung and Upper Aerodigestive
CPTAC Phase 1 Data Kinsinger, Chris Clinical Proteomic Technologies for Cancer Initiative (CPTAC) Phase I TBD
DNA_METHYLATION_LEV1 Gazdar, Adi Identification of biomarkers for lung cancer in never smokers Lung and Upper Aerodigestive
DNA_METHYLATION_LEV2 Gazdar, Adi Identification of biomarkers for lung cancer in never smokers Lung and Upper Aerodigestive
DNA_METHYLATION_LEV3 Gazdar, Adi Identification of biomarkers for lung cancer in never smokers Lung and Upper Aerodigestive
Duke University Breast Data Marks, Jeffrey Expression based markers for breast cancer detection Breast/GYN
EDRN Prostate Data University of Washington Liu, Alvin Y. Biomarkers for Prostate and Bladder Cancer Prostate and Urologic
EDRN WHI Colon Fred Hutchinson Cancer Research Center Hanash, Samir EDRN-WHI Pre-Clinical Colon Ca Specimens Prostate and Urologic
EDRN WHI Colon Harvard University Hanash, Samir EDRN-WHI Pre-Clinical Colon Ca Specimens Prostate and Urologic
EDRN WHI Colon Johns Hopkins Medical Institution Hanash, Samir EDRN-WHI Pre-Clinical Colon Ca Specimens Prostate and Urologic
EDRN WHI Colon Karmanos Cancer Institute Hanash, Samir EDRN-WHI Pre-Clinical Colon Ca Specimens Prostate and Urologic
EDRN WHI Colon Northeastern University Hanash, Samir EDRN-WHI Pre-Clinical Colon Ca Specimens Prostate and Urologic
EDRN WHI Colon Pacific National Northwest Laboratory Hanash, Samir EDRN-WHI Pre-Clinical Colon Ca Specimens Prostate and Urologic
EDRN WHI Colon University of Michigan Hanash, Samir EDRN-WHI Pre-Clinical Colon Ca Specimens Prostate and Urologic
EDRN WHI Colon University of Pittsburgh Cancer Institute Hanash, Samir EDRN-WHI Pre-Clinical Colon Ca Specimens Prostate and Urologic
EDRN WHI Colon Wistar Hanash, Samir EDRN-WHI Pre-Clinical Colon Ca Specimens Prostate and Urologic
EVMS Mass Spec Data Semmes, John SELDI Phase I: Assay Validation-Prostate Prostate and Urologic
Announcement 11/20/2014

New Round of EDRN FOAs

The RFAs for EDRN have been released:
- Biomarker Developmental Laboratories (U01),
- Clinical Validation Centers (U01),
- Biomarker Reference Laboratories (U24),
- Data Management and Coordinating Center (U24).

EDRN Renewal flyer NOTE-New receipt deadline for applications submitted for all EDRN FOAs is January 20, 2015, by 5:00 PM local time of applicant organization.

There will be a Pre-Application webinar to discuss each of the four individual EDRN FOAs on Tuesday, December 2nd, 2014, from 1pm-5pm (Eastern). Potential applicants interested in participating in the webinar should send a message to Dr. Sharmistha Ghosh (ghoshjanjigias@mail.nih.gov) no later than 5:00 p.m. (EST) November 21, 2014. Please mention the FOA of interest in the subject line.

Announcement 10/07/2014

EDRN Patient Advocates will host an EDRN Advocacy Educational Webinar, Biomarkers for Prostate Cancer Detection and Monitoring, on Monday, January 12th, 2015, at 1 p.m. EDT / 10 a.m. PDT. Registration is not required for this. Please click for more information.